I didn't remember this when I wrote the other reply, but I was recently looking at my FASA Trek library and I like their explanation for the DY-100 model being reused in "The Ultimate Computer." It's a more modern, automated variant named the Zeus that was designed by a fan of historical ships.

The first edition of
Trader Captains and Merchant Princes has a detailed stat block and cutaway but no class description, which was added in the second edition of TC.
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