The Delta Flyer barely fits through Voyager's shuttlebay doors - yet in "Drive" we see a much larger ship parked next to the Flyer inside the bay (which had double sized for this episode).
kudos to
KD. Coming from a tech/gaming forum background, the whole 'canon-size-of-Trek-craft'/'how many shuttles does Voyager have' issue is a big can of continuity worms

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I remember the episode when they were going to build the Delta Flyer. Season Five. Chakotay tells Tom that they already have a "full compliment of shuttles."
Shortly after, a friend and I counted, and while we don't know how many shuttles Voyager had, I think we reached somewhere up to 12 shuttles lost or something like that. Not to mention, Neelix's shuttle was also sitting in Voyager's docking bay. We wondered, exactly how big WAS Voyager's shuttlebay/hangar deck?
I then went on to point out that we never actually saw Voyager's shuttlebay in the same way we saw the Enterprise's in TNG. I want to say our first REAL glimpse of it was in Counterpoint, but even then, it was CG and we only saw the one ship departing; as if it was the only ship in there.
I don't know if this was brought up, my pet peeves come from some of the Voyager Borg episodes; specifically, Unity. The woman Chakotay meets, I can't remember her name, says she was assimilated at Wolf 359 and was a science officer aboard the Roosevelt. Sure, we only saw a small portion of the Battle of Wolf 359 in DS9's pilot, but it didn't look to me as if any assimilating could have been taking place. It was outright destruction of the Federation fleet.
Also, assuming people were assimilated, that Borg cube was destroyed. How could they have been alive?
Or am I "thinking in [such] three-dimensional terms"?