Hmm... I don't remember how it changes, but in the comics, they took the suspended version, and did a pseudo 96' TV movie version, as a transition. I think also in another comic story, the Doctor is reformatting the ship with Ace, and it was originally the console room we saw in the TV series, so I am assuming that comic story with Ace running through the ship as it's being changed, and rooms being deleted was also the time when the Lee Sullivan version was coming into being, and that DWM comic is actually pretty cool and a treasure for my digital collection, as it shows what we've never seen before. The TARDIS as it is in transition. The Doctor apparently is interacting with the Grey prints paper on a psychic level which the ship then in turn is modifying itself, based on this interaction. Pretty cool.
I think my reasons for loving the Lee Sullivan model is because of all the console rooms, this one feels more like the classic, but ahead in tech like TNG was at that time in the late 80s and early 90s. I always wondered what the TARDIS would look and feel like in the TNG style.. I like the Lee Sullivan style, and the look of the 3D render. It's got all that style, just missing wood paneling.. cause you know. That's key.. LOL
But they did a transition from the Lee Sullivan model again int he comics and a bridge so to speak to that of the 96 movie version.. here you can see the console room start to look more like the movie version that the 8th Doctor Eventually pilots.
But on the 13th Doctor's Crystal, Snowflake, New agey, steam punk, plumbing look.. I am not a fan of it. I think it's awful.
out of all the Nu Who era Console rooms, I think my Fav. was the nicely lit, 11th Doctor and Clara TARDIS Console room. it was big, without being too much so, and yet cozy like the classic series.