Starkers, whoa, cool your jets. Notice how I ended what I said with "haha" as it was mostly a joke. I was, however, referring to the lack of female writers in Doctor Who, which has become a big issue amongst Who fans as of late from what I've seen on various Who sites. It certainly doesn't help that Helen Raynor received a lot of criticism for the two-parters she wrote under RTD. I thought those stories were good (some bad parts too, but ehh, not enough for me to completely dismiss them) so I'm not sure what the problem is. Moffat has even brought up how they specifically tried to look for female writers to fix that issue but had no luck. I find that hard to believe but what matters more to me is that the writing is good regardless of whomever does it.
At the same time, Moffat *does* make sexist comments. Do I think that makes him a sexist? No. People make jokes like that all the time, and we can't assume that every sexist joke means that someone actually thinks that men or women are inferior to their gender. What I take issue with is that many of his portrayals of main female characters have them appearing bossy and manipulative - which to me, as a woman, is one of the worst stereotypes attributed to my gender. Yes, it can sometimes be true, but on the flipside, sometimes it isn't. It would be nice to see more of that "sometimes it isn't" angle to his female characters. If he doesn't think character development is important, fine, but character development is what I love most in fiction.
As I stated previously though, I love River Song. She is one of my favorite characters and I think he found a good balance there. Please don't come at me as if I think everything RTD did was brilliant and everything Moffat has done is crap. Many of my favorite episodes were written by the latter. I also said I used to dislike Amy Pond, but she grew a bit on me, especially once she stopped cuckolding Rory (bless his heart). That didn't, however, stop her from being bossy and manipulative to both. I had the same reaction with Rose based on her treatment of Mickey but it seemed that she grew past acting like that.
As for your comments about RTD's companions:
Rose - Have you ever lost someone dear to you, like a father you'd never had the chance to grow up with? Are you really claiming that it's horrible that Rose got that chance with a father who was apparently pretty much the same as her real father but whose ideas had made him money? You don't think she has anything to gain from that kind of insight? As for the carbon copy Doctor, that was the worst part of that episode. It reeked of fan service. There was even backlash from fans because it was so blatant. It doesn't, however, change the fact that up until then, Rose was doing her own thing in a parallel universe, using the skills she learned with the Doctor to "save the day."
Donna - What? Donna was raised in an environment where money was extremely important and was the standard upon which she was judged. We know that because, well, we actually saw her mother and the way she acted. We also saw Donna start to appreciate herself more and more for what she was. I would've preferred if she hadn't met with such a tragic end, but not everyone has a happy ending.
Martha & Mickey - I have no issue with the two of them getting together. Both had traveled with the Doctor, and it's got to be hard to hold a relationship with someone who can't relate to experiences like that. They had also been screwed over time and time again and deserved a happy ending.
As stated in the title of the thread, my main issue is Clara. And you know what? I am sick and tired of attempted romances between the Doctor and his companions. RTD was certainly guilty of that, and so is Moffat. I thought we'd be done with it after Donna, but no, Amy Pond starts right in with it. Then there's all this weirdness between the Doctor and Clara with him thinking he was her boyfriend for a while and then saying he would stop. Well, it didn't stop. The "romance" between Danny Pink and her seemed so forced and then we have the Doctor trying to assert his dominance over Danny and Danny responding in kind. It was so ridiculous.