Ordering a monster that has been killing humans isn't being "flawed". It's a natural reaction to any situation dealing with an animal that is considered a danger to those around him. He kept his control and composure throughout the entire mission and only did he realize that the monster was defending instead of attacking he had a change of heart. That's not being flawed, that's being in command of a situation.
Not to mention the hundred or so workers that were becoming out of control that he had to maintain and keep in control.
Kirk's wit and quick thinking always kept him in control of a situation. If things did get out of control I never saw it as a direct result of his actions. If Kirk ever lost his cool, he was either being possessed or duplicated. Kirk was the symbol of what could be considered a perfect captain, if not flawless.
Not to mention the hundred or so workers that were becoming out of control that he had to maintain and keep in control.
Kirk's wit and quick thinking always kept him in control of a situation. If things did get out of control I never saw it as a direct result of his actions. If Kirk ever lost his cool, he was either being possessed or duplicated. Kirk was the symbol of what could be considered a perfect captain, if not flawless.