I can guarantee that as a twelve year old, if I had gotten to see The Wrath of Khan in the theaters, I would be almost squirming in my seat waiting for the big bad space battles to take place. (Enough talk! Start shooting something!) In my latter years, I appreciated the story.
That's pretty much how TMP usurped Wrath of Khan as my favorite Star Trek movie. Spent my entire childhood through teenage years thinking Wrath of Khan was the best of them all (and TUC was a close second) while thinking TMP was boring as hell.
Then the Directors Cut came out and I watched it out of nostalgia and I realized "Holy shit, this is a GOOD MOVIE!"
And why? Because TMP was PURE spectacle. A HELL OF A LOT OF IT, it turns out. The gratuitous starship porn in the flyby scene, the Klingon fleet battle, the enormous scale of V'ger's cloud and V'ger itself. Spectacle of a more subtle variety at a slower pace, delivered in a long softcore dose instead of the rapid-fire servings of STXI. And the final spectacle of the reveal of what V'ger really was:
a real world space probe evolved into a superbeing.
TMP is the gold-standard for what Phantom is talking about: spectacle delivered with subtlety and intelligence. And yet, TMP is a very hard movie to like, and you have to really be in the right frame of mind to even watch it, let alone enjoy it. If all Star Trek movies followed that pattern, the quality of Star Trek as a franchise would improve by a thousand percent...
and nobody would ever watch it again.
I love Star Trek The Motion Picture (especially the Director's Cut). When I was ten (which actually would've made me thriteen in '82), I loved ST TMP, and knew it was not going to be an all out space battle fest. The opening moments with the Klingon battle certainly satiated me at that point. But I did know it was largely going to be some kind of exploration/adventure film, and I did not leave dissatisfied. I got to see the Enterprise, Kirk, Spock, McCoy, and all the gang on the big screen.
Wrath of Khan was marketed much differently. Its focus in the commercials was the space battles (which actually are more like snipes rather than slugfests). But as is the case with trailers, they make the space battles look much more exciting than they actually are. (witness First Contact). So that's why, as a thirteen year old (again, if I had actually gotten to see TWOK in the theaters instead of that POS I was forced to watch known as ET The Extra Terrestrial), I guarantee I would've been sitting on pins and needles waiting for the big space battles.
Star Trek II I am sure got some repeat viewings on the big screen by those who could afford to do so. I don't know that TMP got so many repeat big screen attendees. But I agree with you. If all the movies were done with the grace that TMP had, yes, they would be great to see on the big screen.....
once.
Whenever someone makes a movie, I am sure that there is the hope in the back of their minds that somehow the movie compels folk to go to repeat viewings. It doesn't always work. Clearly, with ST09 and STID, it did.

I saw ST09 five times on the big screen, and STID only twice...largely because of time constraints.
Does it have to be all one way or all the other though?
That was part of what was being attempted: presenting a "middle ground" interpretation with the better features of
both visions of Trek. I thought
martokand I did a good job of achieving that.
The bolded part is exactly why showing the policy debate between Kirk, Spock, and McCoy is the stronger presentation. The version we came up with in the OP is about the people and the moral question.
JJ's version is about the cool gadget, running through the trees, and Enterprise on the bottom of an ocean.
A debate like you wrote almost certainly happened before they tried their cock-eyed plan. It's nice dialogue, but in a 120 minute movie, time is precious, and if you can establish that moral ambivalence about what they're doing while shooting the action, all the better (especially since as we listen to the debate know they're going to decide to do it, anyway).
We find out from Spock in the volcano that regulations really don't permit what they are doing. Kirk believes they're simply skirting them by not being seen (which he must've convinced Spock is OK because Spock is in the volcano). We establish Kirk's feeling that "in the face of death, laws fall silent" when he tells Spock in the transporter room that it's no big deal that they were seen.
To me, it doesn't need fixing. The moral quandary of what they were doing wasn't even what was important. Kirk would've done it as a 45 or 55 year-old (albeit in a slightly less convoluted and stupid way). What needed to be established was how recklessly and carelessly they were going about their business. It set the tone for the movie and the Spock and Kirk story arcs: that Spock may have harbored a death wish; and that over the year he's been captain of the Enterprise Kirk has been reckless, egotistical, is full of hubris, and doesn't know luck from skill. We know after that scene that he is going to have to own up to, face, and then overcome all those weaknesses somewhere in the story.
I'll stipulate that what you said is true. That being said, the
experience of the film is so badly tilted in favor of the "high points" or "beats" or whatever you want to call them that it's like reading the "Cliff's Notes" version of the story. Covers the same material, but in a bare bones manner that ultimately is less satisfying.
I remember one time doing a direct interpretation of an excerpt from the novel of The Exorcist by William Peter Blatty. (Done with iClone 4.3 at the time). It was a good lesson in why screenwriters do adaptations the way they do.
The scene I refer to is Father Karras' second meeting with the possessed Regan. That scene, if it were played out like the book, ran ten minutes. The scene as portrayed in the movie was probably half that.
When doing a movie that is meant to be fast paced (as ST09 and STID were), you don't want to bog down with a lot of dialogue and debate. Even though Phantom and I felt that we had struck a good balance, clearly, that is not the perception of everyone else who has read our take....and I accept that perception with no ill feelings whatsoever.

I will always prefer the movies as offered up by JJ and Bad Robot.
Still, it was a fun, and enlightening exercise, and I heartily thank Phantom for his participation and collaboration in it.
I am hoping to get a new computer soon, with iClone 6 Pro, Hit Film 3, and 3DExchange 6 Pro, as well as the latest version of Blender. Reason: I did my own tribute film called "Star Trek: Captain's Logs Declassified" which was basically a big space battle between the refit Enterprise (story is set between TMP and TWOK) and a Klingon K't'inga battlecruiser. Not only do I want to do a redux of the visuals in the battle, but I actually want to put in a character driven story so that it comes across more like a missing episode or movie, rather than just starship porn with Kirk's narrative voice over. I'm working on the script now.
NOTE: You might notice a quotation frack up in this post....I sincerely apologize. If I miscredited the quote, I am very sorry.