Well I'm not an advocate of the "central reactor" setup most days, but in any case that is not quite what I was suggesting.Well, the idea that one engine nacelle is the matter engine/generator and the other is the antimatter engine/generator (Perhaps deserving a thread of its own?) does have some utility in smoothing over some minor discontinuities in TOS/TAS, provided we allow for the mixing of the matter-antimatter in a central reactor, but in the end I think it crates more problems than it solves.
Using the dialogue from OOOPIM, I propose that each nacelle has within it antimatter management machinery (AKA antimatter engine) and matter machinery (AKA matter engine). Each nacelle mixes its own matter and antimatter, with the reactant output delivered directly into the warp coils. In an emergency, a properly working (i.e. regenerated) nacelle can be used the "jump start" the other one, but otherwise they tend to operate independently (albeit in tandem)
So, did the Beagle just have a lot of "jump start-able" nacelles? Seems odd that they would, if the Enterprise only has one.
This suggests to me that reactors 1, 2 and 3 are of a different type than the one(s) already in use since he felt it necessary to be so specific?
However the process is very inefficient and energy intensive
Drat, how did I miss that? I suppose we could allow Scotty a certain amount of hyperbole (he can't access the nacelle reactor or warp coils, but he can crawl into the magnetic antimatter bottle) but still, hmmm....On the other hand, in "That Which Survives" Scotty says “The engines are running wild. There's no way to get at them.” This makes sense since the engines are in the nacelles -way up there on those thin pylons, and therefore not easily accessible under the best of conditions, and certainly not a place you’d want to be when “The engines are running wild”. Yet we do see that Scotty latter accesses the matter-antimatter reaction chamber, so we can infer from this that “the” reactor is not in either of the nacelles.
So there's both matter and antimatter stored in the nacelles, yet the reactor is down in the secondary hull? That's an awful lot of piping and looping back on oneself! Also, I'm not sure I like the idea of raw antimatter having to travel past the entire length of (potentially active) Warp Coils in order to top the main storage pods in the secondary hull. The whole process becomes much safer if the antimatter reserves are contained in the forward domes/spheres; the matter tankage (including the reserves) is perfectly fine down in the secondary hull, as it is less volatile to start with!...the light show in the domes may more likely be matter collected by the Bussards in a gaseous state with “hot spots” of glowing plasma? I see the domes of the TOS E as being complete spherical “pods” with the forward ones for matter storage and the aft ones for antimatter, the latter being stored in a condensed cryogenic state -hence the dark non-glowing appearance.
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