The Zelbinion in the Farscape episode "PK Tech Girl" perhaps? Perhaps not.
Deckerd The crashed ship that they found on Miranda in "Serenity" has the registration C57D, which is the same as that of the starship in "Forbidden Planet".
I'm sure there must be good examples in literary SF but none really spring to mind, except the one near the beginning of Iain M Banks "The Algebraist".