Did I miss something, because I don't really see what the big deal is about the Zeus thing in the new comics myself. The character has apparently had all kinds of different backstories over the years, and I don't see this really changing all that much about her.
And in any case, I've always found WW's origin to be the least interesting thing about her. I'd much rather just watch her adjusting to our world and interacting with other members of the Justice League.
The Zeus thing is a big deal. Where she was modeled by her mother longing for a child and granted life by the gods (plural, female gods included), everything special about her now comes from who her father is. That takes a whole lot of the empowerement of the character away.
There is no good way to do Wonder Woman's origin. Having the feminist superhero's powers come from her daddy is problematic at best, but the old "made from clay" origin is shit.
The animated movie included the clay origin, and they needed about a minute of film to do that. What's the big deal?! I don't remember anybody complaining about how that was handled, or that it was hard to understand, or anything like that. Actually, most of the criticism on the clay origin has only come after Azzerallo screwed with it.
But even then, why adress any origin at all?! The Lynda Carter series (at least the first season, which is all I've seen of it so far) and the "Justice League" cartoon didn't go further than "She's the princess of the Amazons", and that was absolutely fine.