Could be that in response to the destruction of Vulcan (which Lindelof said had a 9-11 effect on the Federation) some group within Star Fleet starts experiments to create soldiers that they think will now be needed.
So, they crack open the Eugenics War cook book, and begin secret experiments on unwitting (and unknowing) Star Fleet personnel. One of them (John Harrison) finds out about it, and gets a little upset.
So, they crack open the Eugenics War cook book, and begin secret experiments on unwitting (and unknowing) Star Fleet personnel. One of them (John Harrison) finds out about it, and gets a little upset.