Good extrapolation, that's certainly enough as a top-up (even if not to run "indefinitely") However, when at warp how much of the real space is the Enterprise really interacting with? The whole point is to warp space around the ship, isn't it? Wouldn't that also include interstellar hydrogen?
That's a great point.
Great question. Perhaps the collector's field extends past the warp bubble, so, interstellar hydrogen is streaming into the warp bubble at FLT speeds, but maybe the warp field also slows the concentrated streams of hydrogen down to be funneled into the collectors...more treknobabble...
That's thinking outside the box alright, but if the nacelle collector domes are outside the warp bubble, then they would be taking the long way through space, and take tens of thousands of years longer than the rest of the ship to travel between two star systems. It doesn't pass the laugh test.
Another question I would have is this: why are they trying to scoop up a few hydrogen atoms in space when they could just carry a big tank of hydrogen aboard the ship? Hydrogen isn't scarce. Getting it from water is the simplest thing in the world. You can have all you'll ever need in a tank before you leave spacedock.