He would probably argue that a human doctor is superior because it can actually empathize, touch, care for the patient whereas the EMH is only simulating those behaviors.
If I were the EMH, I'd ask McCoy to prove that HE wasn't simulating those very same behaviors.

srsly, the very fact that McCoy could converse with the EMH as he would with a flesh-and-blood human is reason enough to suggest that the two could eventually respect each other as sentient beings AND professional physicians. McCoy has never met anyone or anything like the EMH - certainly no computer that he could talk to like one would a human being.
I'm not saying that McCoy and the EMH could necessarily be friends, but they would certainly find some sort of common ground.
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