I agree 100%!If these kinds of arguments run long enough the 'a wizard did it' or 'Q did it' type defences can always be raised or the new 'it's a new timeline and the (inconsistent) laws of Trek physics can be re-written to accomodate'. If the writers actually cared, these kind of errors and plot holes wouldn't be there and if the writers don't care there will always be a percentage of viewers who don't care or whose suspension of disbelief threshold is higher.
Most of the plot holes could have been covered with tighter dialogue i.e a few brief lines. Some should have been re-written e.g. using supernovas and black holes instead of made-up phenomena. I also think if Spock had beamed Kirk to the brig of the Starfleet outpost we could have saved ourselves 15 mnutes of pointless trekking through the snow just to fight a CGI monster, had Spock Prime free Kirk from the brig to overcome the ludicrous coincidence of stumbling into him in a cave and overlook why starfleet officers were ignoring a distress beacon from an escape pod.
I think a core problem was that the creators did not have a story to tell, they had a movie contract that was over schedule the day the contract was signed and they clearly felt the film required some kind of story onto which they could pin-up great sets, effects, and actors. The dialog has a similar telltale lack of coherence, consistency, or believability.
The film's production and content had much in common with the idea that God created the colors of the sky and roses to be most pleasing to the human eye, rather than human eyes evolving to see environmental colors and react emotionally, and I suspect this commonality is not coincidence.