The last time we saw a Prometheus class starship was the series finale of Voyager in 2001. Other than Star Trek: Nemesis which premiered a year after that in 2002, we never saw the 24th century of the prime universe again for the next 18 years until Star Trek: Picard in 2020. In-universe, the time between Endgame (2378) and the start of PIC (2399) was 21 years. I'm sure in that 21-year span of time, Starfleet produced many Prometheus class ships; we just didn't see them on screen because there was no prime universe 24th century Trek on TV at that time.