Umm, the inconsistency always was finite torpedoes and limited shuttlecraft. No other starship in history suffered from such things - so why would Janeway's, all of a sudden?
And the explanation was built in to the premise. Janeway's ship was broken. And then got better, resetting things to Star Trek Normal. Wasting perfectly good screen time in "solving" anything wouldn't have been an improvement. The writers would merely have been mired down in trying to turn Star Trek into Battlestar Galactica, two dissimilar universes with dissimilar rules. You can't do ragtag fleet with replicators!
In the end, the writers got pretty good mileage out of "replicators broken" and "locals know nothing about replicators" and "replicators make for great baubles for the natives" and so forth. But that could only ever carry for so long before the show ceased to be Star Trek. Two seasons or thereabouts was just about right.
Timo Saloniemi
Fortunately there is a way to explain why Voyager had unlimited resources of shuttles and torpedoes.
From Captain Janeway's log:
Stardate 48942.07 (Friday 10 December 2371)
The latest events have put us in a difficult situation since we have wasted a lot of torpedoes and damaged a shuttle. Therefore I have asked Commander Chakotay, Liutenant Tuvok and Lieutenant Torres to come to my ready room to discuss an idea I have.
"You all know what has happened" said Janeway. "After the recent adventure with the Furies (Voyager book "Invasion-The Final Fury" which took place between the episodes "Elogium" and "Twisted"), we have lost a shuttle. We have also wasted too many torpedoes. If we keep on wasting our torpedoes in the same way, we will be out of them soon. Considering our long journey and the risk of running into hostile aliens, we need both shuttles and torpedoes. Therefore I want to discuss this idea I have."
"What woud that be?" Chakotay asked.
"I suggest that we set up a special workforce on the ship" Janeway said. "The Shuttle and Torpedo Building Team". "Some really skilled people who can have as their priority to build shuttles and torpedoes when it's necessary. If we do so, we will have a chance to avoid being without those in a critical situation."
"That sounds like a good idea", Chakotay said.
"Indeed. And a very logical idea too considering our need for such items" Tuvok said.
"Exactly my thoughts too", said Janeway. "B'Elanna, do you have any people to spare?"
"Well, I think that Dalby, Henley, Gerron and Chell would be perfect for the job. And I would also like to have Lt. Carey in charge of the team. He's the right person for that. If necessary, I can give a helping hand too in a crisis. But I must point out that I need these people in Engineering too and that they would only work with shuttles and torpedoes when necessary."
"I agree", Janeway said. "I would also suggest that we find some other people too among the crew who can assist with shuttle and torpedo building when necessary". Janeway touched her combadge: "Mr Carey, can you come to my ready room immediately!"
And so The Shuttle and Torpedo Building Team was born. From the beginning, it was Lt.Carey, Dalby, Henley, Gerron and Chell. Later on Rollins, Vorik, Samantha Wildman and The Borg baby were added to the team. In fact, those people are the true heroes on Voyager. Without their hard work, Voyager's mission would have been almost impossible.
