"These Are The Voyages" which is supposed to be an accurate portrayal of the NX-01's last mission, seen on the holodeck 200 years later (despite the total rewrite in The Good That Men Do, a Section 31 cover-up obviously wasn't the intent of the ENT writers)
I disagree that it is confirmed that it "wasn't the intent". There were so many bizarre holes in that program that it may well have been proven to be an inaccurate account once the proposed Season Five was underway. Maybe not Section 31, but some other reason.