For JR audio I selected MT32 for music device with port 330 and for sound I used soundblaster pro with port 220 irq 7 dma 1. I do not have access on this forum to attach files so I cant post the patched files.
The patches are only to fix General Midi reset issues anyway. If you are going to use MT-32 then all you really need is to overwrite your games trekjr.exe with the new one tikalat made which fixes the MT-32 detection issue.
I know this is an obvious and probably silly question but just to cover all bases you are using the CD collectors edition and not the floppy version? I ask as tikalats exe is specifically for the collectors CD and wont work (and is not needed) for other versions.