Kirk's speech was this:
"There will always be those who mean to do us harm. To stop them, we risk awakening the same evil within ourselves.
Our first instinct is to seek revenge when those we love are taken from us. But that's not who we are.
We are here today to rechristen the USS Enterprise, and to honor those who lost their lives nearly one year ago.
When Christopher Pike first gave me his ship, he had me recite the captain's oath. Words I didn't appreciate at the time. Now, I see them as a call for us to remember who we once were, and who we must be again."
He's definitely referring to the events of Into Darkness as happening "nearly one year ago." The part about Pike and the captains oath is a distinctly separate sentence.
Thing is, to me anyway, Chris Pine's delivery kind of makes it sound like:
"We are here today to rechristen the USS Enterprise, and to honor those who lost their lives. Nearly one year ago, when Christopher Pike first gave me his ship, he had me recite the captain's oath..."
Indeed, since IDW seems to be unaware of a year's gap, perhaps they too were confused? Although, in their case, you'd think the script would be made available and the way the speech was written would make it clear what was meant to be said.