I too thought this episode was better than the pilot...and I too, loved the pilot. This is just a great show and I'm looking forward to see where it's heading.
One minor nit though, I hope this story line about the cop and her partner and this shooting has something to do with the main plot. Right now it doesn't feel like it has anything to do with anything and is taking away from the plot with the clones.
It's pretty obvious that it is related.