Yet Kira in "The Darkness and the Light" was particularly unrepentant about the occupation/resistance thing. If five years of dealing with the ambiguities of the post-occupation era hadn't weaned her of that, I doubt the second occupation would really make a difference, either. For all she cared, collaborators still deserved eternal exile, just as in the titular second season episode.
Of course, the second season was an early stage of the post-occupation history of the planet, and all sorts of forces could have been at play to reverse the Proclamation later on. But Kira being one of those? Doesn't ring true.