Of course if they go back to the original film and examine it all (they may not have time/desire) it does bring up an interesting dilemma.
I've only seen a little of the TOS-R (not in HD) but there were some extreme closeups shots somewhat spolit by being cropped for widescreen.
With TNG there might be other takes and/or other angles. Instead of using a cropped closeup they could use a cropped wideshot. But is that a step too far?